Some useful Bioinformatics links
....nlm.nih.gov/pmc/articles/PMC4083407/ GATB/DiscoSnp: DiscoSnp is designed for discovering...thub.io/picard/command-line-overview.html Chromosome-scale scaffolding of de no...Genome Architecture and Evolution of a Unichromosomal Asexual Nematode - Scienc...2254 days ago
2229 days ago
Installing Bio::SCF perl module
Most Perl modules are written in...RCE=1 -DHAVE_HIDDEN -c -o gzclose.o gzclose.cgcc -O3 -D_LARGEF...E_HIDDEN -DPIC -c -o objs/gzclose.o gzclose.cgcc -O3 -fPIC -D_...cking for sys/wait.h that is POSIX.1 compatible... yeschecking.../bin/install -c -m 644 'utils/os.h' '/usr/local/include/io_lib...2230 days ago
Tools to Predict the Impact of Missense Variants !
...rcularity may erroneously conclude that circularity confounded tools are most accurate among all tools, an...r mis sense muation detection ... PolyPhen‐2 (PP2)“Predicts possible impact of an amino acid...2215 days ago
Binding Site Prediction in Protein !
...h between residues that are conserved due to structural restraints from those due to functional restraints...tural models of the binding site. Ligands bound to structures are superimposed onto the model and use to p...2214 days ago
Protein-Protein Interaction Sites Predictions !
...ural network method for predicting protein-protein interaction sites HOMCOS A server to predict interact...s with known 3D structure. PFplus A tool for extracting and displaying positive electrostatic patches on...2214 days ago
Ligand Docking Tools and Software !
...irical) Surflex Systematic (IC/MA)Flexible ligandHammerhead based (empirical) Point to note: Several studies have shown that the performance of most docking tools is highly depe...2214 days ago
Tools for Protein-Protein Docking !
...ape complementarity and electrostatics Re-scoring and cluster...TShape complementarity, electrostatics and VDWNone Escher NG...OCK Global rigid searchElectrostatic ,VDW and desolvation ene...formational space and then choose the most suitable method for...2214 days ago
2202 days ago
Learning Python Programming - a bioinformatician perspective !
Python Programming is a general purpose programming language that is open so...flexible, powerful and easy to use. One of the most important features of python...ly correct and supports newer features. I will post tutorial on daily basis on t...2195 days ago