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Results for "Paired end sequencing"

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• • Rahul Agarwal@raag

  

  http://www.biorxiv.org/content/early/2016/10/05/079301 #omics #genetics#sequencing #animal

  2782 days ago

• • Jit@jit.aber

  

  Assembly and repeats https://www.coursera.org/learn/dna-sequencing/lecture/fKX4C/lecture-third-law-of-assembly-repeats-are-bad #Assembly #Repeats #Bad

  2715 days ago

• • Shruti Paniwala@shruti

  

  Fasta sequence length: awk '/^>/ {if (seqlen){print seqlen}; print ;seqlen=0;next; } { seqlen += length($0)}END{print seqlen}' file.fa #Length #Linux #OneLiner

  2673 days ago

• • Jit@jit.aber

  

  Assembly and alignment http://schatzlab.cshl.edu/teaching/2012/CSHL.Sequencing/Whole%20Genome%20Assembly%20and%20Alignment.pdf

  2671 days ago

• • Jit@jit.aber

  

  Whole-Genome Sequencing (WGS) PPT http://www.bx.psu.edu/~ratan/Sequence%20Analysis.pdf #PPT #WGS #Ratan

  2635 days ago

• • Jit@jit.aber

  

  Add color to vim. Open vi .vimrc and at the end of the file add "syntax on" #Vim #Syntax #Highlight #Vi #Linux

  2630 days ago

• • Jit@jit.aber

  

  To add something to end of all header lines: $ sed 's/>.*/&WHATEVERYOUWANT/' file.fa > outfile.fa #Add #Fasta

  2585 days ago

• • Shruti Paniwala@shruti

  

  #Assembly #Algorithms for #Next-Generation Sequencing Data https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2874646/

  2505 days ago

• • Rahul Agarwal@raag

  

  Complete and excellent tutorial for Single Cell Sequencing- https://hemberg-lab.github.io/scRNA.seq.course/index.html

  2352 days ago

• • Jit@jit.aber

  

  Get the reads in fastq file: awk '{s++}END{print s/4}' file.fastq #reads #count #ngs #fastq

  2384 days ago

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