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Bipype is a very useful program, which prepare a lot of types of bioinformatics analyses. There are thre...to reference sequence(s). All of these analyses will be shown with Krona program, which allows to show hierarc...2711 days ago
E-MEM: Efficient computation of Maximal Exact Matches
E-MEM is a C++/OpenMP program designed to efficiently compute MEMs between large genomes. See the README file for instructions on how to use E-MEM. E-MEM source code The sou...2696 days ago
- ...es based on long molecule sequences, often with dramatic outcomes. The program uses information from assembl...ns which PacBio long reads cannot. Although we have not evaluated this program for assemblies generated with...
2692 days ago
- MCscan is a computer program that can simultaneously scan multiple genomes to identify homologous chromosomal regions and subsequently align these regions using genes as anchors....
2690 days ago
Prodigal (Prokaryotic Dynamic Programming Genefinding Algorithm)
Prodigal (Prokaryotic Dynamic Programming Genefinding Algorithm) is...crobial (bacterial and archaeal) gene finding program developed at Oak Ridge Nation...ares favorably with other gene identification programs, and usually falls under 5%....2683 days ago
- Cgaln (Coarse grained alignment) is a program designed to align a pair of whole genomic sequences of not only bacteria but also entire chromosomes of vertebrates on a nominal desktop...
2628 days ago
- BioDownloader is a program for downloading and/or updating files from ftp/http servers. The program has unique features that are...
2624 days ago
TMAP - torrent mapping alignment program General Notes
TMAP - torrent mapping alignment program General Notes TMAP is a fast and accurate alignment software for short and long nucleotide sequences produced by next-generation sequencing t...2588 days ago
- The official documentation of the Perl 6 programming language is now published! Bes...of built-in subroutines and methods. Perl 6 ProgramsA collection of documents describing how to run the Perl 6 executable program and other utilities, how to d...
2647 days ago
- ...peat sequence distributions in one whole-genome DNA sequence by comparing the genome to itself.It is a stand-alone graphical user interface (GUI) program which runs on Linux, Unix, Ma...
2633 days ago
