3951 days ago
Well designed regular expression cheat sheet
In our computational biology work, we mostly play with DNA or AA string. For string based programming work this regular expression cheat sheet is really helpful. Keep it handy.3950 days ago
3917 days ago
3917 days ago
Download mutliple fasta file from NCBI in one GO!!
if you have less time, then use three ways mentioned in bookmark link to extract/...already have a list of GIs or accession IDs . Alternatively, use one liner perl script: perl -ne 'if(/^>(\S+)/){$c=$i{$...3911 days ago
3909 days ago
3904 days ago
Bioinformatics Algorithm Demonstrations and Tutorials
Abstract This project presents demonstrations of selected computer science algorithms imp...a manner that is easily comprehensible to users with little programming experience. The a...proaches to approximate string matching (dynamic prog...3705 days ago
Public Databases for Bioinformatics !
...ete something and notice within 24 hours we can recover. Otherwise...ot. (vs home which is properly backed up ) intermediate...*NOT BACKED UP* Some parallel programming patterns: # gzip a...ef worker(queue, ofp): # Try without this random.seed()...1140 days ago
Bioinformatics software for biologists in the genomics era
The genome sequencing revolution is approaching a landmark figure of 1000 completely sequenced genomes. Coupled with fast-declining, per-base sequ...he user-friendly software needed and the scripting/prog...3787 days ago