2590 days ago
2589 days ago
2530 days ago
2507 days ago
MOSS: A System for Detecting Software Similarity
Moss (for a Measure Of Software Similarity) is an automatic system for determining the similarity of programs. To d...currently analyze code written in the following languages: C, C++, Java, C#, Python,...2341 days ago
LIBSVM -- A Library for Support Vector Machines
...-J. Lin. Working set selection using second order information for training SVM. Journal of Machine Lea...bsp;sources GUI demonstrating SVM classification and regression Python, R, MATLAB, Perl...2470 days ago
DFAST: a flexible prokaryotic genome annotation pipeline for faster genome publication
We developed a prokaryotic genome annotation pipeline, DFAST, that also supports genome submission to public...uture. Availability and Implementation The software is implemented in Python 3 and runs in both Python 2...2366 days ago
miniasm: very fast OLC-based de novo assembler for noisy long reads
Miniasm is a very fast OLC-based de novo assembler for noisy long reads. It takes all-vs-all read self-mappings (typically by minimap) as input and output...2353 days ago
jobTree based python wrapper to run the genome simulation tool suite Evolver
evolverSimControl (eSC) can be used to simulate multi-chromosome genome evolution on an arbitrary phylogeny (Newick format). In addition to simply running evolver,&...2341 days ago
NanoSim: nanopore sequence read simulator based on statistical characterization.
NanoSim, a fast and scalable read simulator that captures the technology-specific features of ONT data and allows f...to produce in silico reads for a given reference genome. NanoSim is written in Python a...2332 days ago