Results for "RNA structure"
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Motif based sequence analysis suits The MEME Suite allows the biologist to discover novel motifs in colle...er motif-based analyses. The MEME Suite supports motif-based analysis of DNA, RNA and p...2702 days ago
Modular, efficient and constant-memory single-cell RNA-seq preprocessing
With kallisto | bustools you can Generate a cell x...e class count matrix Perform RNA velocity and single-nuclei RNA-seq analsis Quantify data fr...Obtain QC reports from single-cell RNA-seq data The kallisto...ient pre-processing of single-cell RNA-seq,...1138 days ago
- v0.0 by Glenn Hickey (hickey@soe.ucsc.edu) Progressive Cactus is a whole-genome a.... In order to run the included tools (ex hal2maf) in the submodules/ directory structure, first source progressiv...
2677 days ago
FSA: Fast Statistical Alignment
FSA is a probabilistic multiple sequence alignment algorithm which uses a "distance-based" approach to aligning homologous protein, RNA or DNA sequences. Much as dis...ilable only for small-scale analyses of proteins or RNAs to l...2657 days ago
fineSTRUCTURE v2 & GLOBETROTTER
Software available at this site FineSTRUCTURE version 2, a pipeline for running ChromoPainter and FineSTRUCTURE for population inference. A GUI...d from the Downloads page. FineSTRUCTURE R scripts, a facility for exp...et the results of ADMIXTURE and STRUCTURE-like mixture models. RADpain...2650 days ago
- The hive plot is a rational visualization method for drawing networks. N...neral and tunable and useful as a starting point in visually exploring network structure. More at http://www.hiv...
2647 days ago
Strand Life Sciences announces the release of Strand NGS v3.1 at ASHG 2017
Strand Life Sciences announces the release of Strand NGS v3.1 at ASHG...Strand NGS now supports large scale RNA- and small-RNA-Seq and Unique Molecular Iden...GS). The first theme is large-scale RNA-Seq data analysis. Current cr...ular Identifiers, or UMIs, for DNA-, RNA- and...2398 days ago
Pacbio Long Reads Compatible Software and Tools
The following software packages are known to be compatible with PacBio® data, in addition to PacBio's own SM...ariations Detection Reference-based alignment Consensus and variant calling RNA analy...2619 days ago
- NGS data are just a bunch of sequences, you have no idea which region in the genome each sequences comes from, w...e for DNA-Seq data and Tophat, STAR or HISAT for RNA-Seq d...
2572 days ago
- The process of finishing a genome and moving it from a draft s...ishingContigs from a shotgun assembly are typically linked together in a graph structure that can serve to guide finis...
2553 days ago
