Results for "Ra"
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...software tools, developed and used by the Vertebrate Genome Biology Group at the...sequence alignment packages: Satsuma, a highly parallelized program for high-sens...http://www.broadinstitute.org/science/programs/genome-biology/spines...3021 days ago
- ...lift over pipeline Lift over is the process of transferring annotations from one...s and good quality annotations (maybe manually curated or experimentally verified...nt data to define how a coordinate or coordinate range on the old assembly should...
3020 days ago
- ...e locations of all centromeres in a single yeast genome by exploiting the centromeres’ tendency to cluster in 3D space. We first demonstrate the accuracy of Centurion in identifying...
3018 days ago
- ...nalyses. Importantly, HiCdat is focussed on the analysis of larger structural features of chromosomes, their correlation to genomic and epigenomic features, and on comparative studies. It uses simple i...
3018 days ago
- This tutorial assumes no previous knowledge of scripting or programming, yet progresses rapidly toward an intermediate/advan...to write scripts. This book is suitable for classroom use as a general introduction to programming...
3012 days ago
- This is a collection of libraries and high-quality end-user scripts for bioinf...ersion between file formats. The Bio::ToolBox libraries provide a unified, abstra...e data files. They rely on BioPerl SeqFeature libraries and related adaptors to a...
3011 days ago
- Generic Genome Browser Version 2: A Tutorial for Administrators This is an extensive tutorial to take you through the main features and gotchas of configuring GBrowse as a server....
3011 days ago
- ...oci from short-read sequences, such as those generated on the Illumina platform....work with restriction enzyme-based data, such as RAD-seq, for the purpose of buil...and conducting population genomics and phylogeography. More at http://catchenla...
3006 days ago
- ...oftware is designed to identify both simple and complex rearrangements from paired-end sequencing data. Users could ran it easily by just alling&nbs...elter.py with proper parameters. It's also possible to ran it on multiple cores by call...
3001 days ago
- Destruct is a tool for joint prediction of rearrangement breakpoints from single or multiple tumour samples. More at https://bitbucket.org/dranew/destruct
3001 days ago
