Tags: Bioinformatics, NGS, Stampy, Reads, Mapping, Map
2907 days ago
Tags: Bioinformatics, LoRMA, Tool, Correcting, Errors, Reads, Sequencing
2167 days ago
CovCal: Coverage / Read Count Calculator
Coverage / Read Count Calculator Calculate how much sequencing you need to hit a target depth of coverage (or vice versa). Instructions: set the read length/configuration and genome size, then select what you want to calculate. Written by Stephen Turner, based on the Lander-Waterman formula, i...Tags: Bioinformatics, covcal, Tool, Coverage, Reads, Sequencing
2167 days ago
Tags: Bioinformatics, NGS, Reads, Silulator, INDEL, SNPs, Simulation
2874 days ago
Tags: Bioinformatics, Analysis, NGS, PHYMMBL, Genome, MetaGenome, Classification, Reads
2765 days ago
Tags: Bioinformatics, Stats, Reads, NGS, Simulator
2741 days ago
Maq: Mapping and Assembly with Quality
Maq stands for Mapping and Assembly with Quality It builds assembly by mapping short reads to reference sequences. Maq is a project hosted by SourceForge.net. The project page is available athttp://sourceforge.net/projects/maq/. Maq is previously known as mapass2. Run Maq Now...Tags: Bioinformatics, Maq, Variation, Mapping, Quality, Reads, SV, NGS, Genome
2722 days ago
BIMA V3: an aligner customized for mate pair library sequencing
Summary: Mate pair library sequencing is an effective and economical method for detecting genomic structural variants and chromosomal abnormalities. Unfortunately, the mapping and alignment of mate pair read pairs to a reference genome is a challenging and time consuming process for most NGS alig...Tags: Bioinformatics, Analysis, Genome, Mapping, NGS, BIMA, Reads
2700 days ago
Tags: Bioinformatics, Alignment, NGS, Reads, YAHA
2663 days ago
Tags: Bioinformatics, Alignment, NGS, Reads, SpeedSeq
2663 days ago