“One code to find them all”: a perl tool to conveniently parse RepeatMasker output files
...them all is a set of perl scripts to extract useful information from RepeatMasker about transposable elements,...e their sequences and get some quantitative information. Assemble RepeatMasker hits into complete TE copies,...2175 days ago
RepeatMasker compatible blast tool
RMBlast is a RepeatMasker compatible version of the standard NCBI blastn program. The...on is the addition of a new program "rmblastn" for use with RepeatMasker and RepeatModeler. RMBlast supports RepeatMasker searches by adding a few nece...1989 days ago