Results for "RepeatMasker"
Bio-Scripts
Identify genome-wide synteny with LASTZ alignment
...Step1：Mask the repeat sequences for both genomes and chromosomes. RepeatMasker -pa 40 -nolow -norna -gff -xmall -lib custom.TE.lib_for_rice.fa AAChr1.txt RepeatMasker -pa 40 -nolow -norna -gff -xm...530 days ago
Perl script to find inverted repeats !
...s; use Bio::SeqIO; use Bio::Tools::Run::RepeatMasker; my $genome_file = "genome..._seq(); my $seq = $seqobj->seq(); # run RepeatMasker my $rm = Bio::Tools::Run::Re...report = $rm->run($genome_file); # parse RepeatMasker output while (my $rm_result...438 days ago
