Results for "Results"
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Maq: Mapping and Assembly with Quality
...and maq_eval.pl to the $PATH or to the same directory. Simulate diploid reference and read sequences, map reads, call variants and evaluate the results in one go: maq.pl demo ref.f...2732 days ago
- ...nt and the reference genome of the species. However, in most typical protocols, this information is disregarded and the reference genome is used. Results. We provide a new approach th...
2728 days ago
- ...n a de Bruijn graph, capable of assembling a human genome on a desktop computer in a day. The output of Minia is a set of contigs. Minia produces results of similar contiguity and acc...
2716 days ago
e-RGA: enhanced Reference Guided Assembly of Complex Genomes
...able to assemble, de novo, an organism sequenced with short reads, the results are still far from those achi...bine de novo and reference-guided assembly in order to obtain enhanced results.2704 days ago
- ...ead overlaps and without requiring the target fragment size as input. In addition, it implements a statistical test for minimizing false-positive results. Together with a highly optim...
2704 days ago
DnaSP v5: a software for comprehensive analysis of DNA polymorphism data
...analyses on multiple data files; (ii) haplotype phasing; (iii) analyses on insertion/deletion polymorphism data; (iv) visualizing sliding window results integrated with available gen...2656 days ago
fineSTRUCTURE v2 & GLOBETROTTER
...Downloads page. FineSTRUCTURE R scripts, a facility for exploring the results when the GUI is unavailable....Downloads page. AdmixturePainting, A set of R tools to inmterpret the results of ADMIXTURE and STRUCTURE-li...2648 days ago
- GenomeComp is a tool for summarizing, parsing and visualizing the genome wide sequence comparison results derived from voluminous BLAST textual output, so as to locate the rearrangeme...
2644 days ago
- ...ing custom 3D models. Ensembl-derived and imported sequences can be analyzed by using a suite of multiple and pair-wise alignment algorithms. The results of these comparative analyses...
2644 days ago
ConPADE: Genome Assembly Ploidy Estimation from Next-Generation Sequencing Data
...used for whole genome shotgun (WGS) sequencing data. They also show applicability of the method for variant calling and allele dosage estimation. Results for simulated and real datase...2638 days ago
