Results for "SViper"
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Call sviper ~$ ./sviper -s short-reads.bam -l long-reads.bam -r ref.fa -...e.g. with the IGV browser. In that case you want SViper to output the polished and al...via the option --output-polished-bam: ~$ ./sviper -s short-reads.bam -l long-re...1611 days ago
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- Call sviper ~$ ./sviper -s short-reads.bam -l long-reads.bam -r ref.fa -c variants.vcf -o polished_variants This will output a polished_variants.vcf file, that contains all the refined variants. Sometimes it is helpful to look at the polished sequence, e.g. with the IGV browser. In...
Tags: SViper, Swipe, Structural, Variants, ONT, PacBio, reads, Illumina
1611 days ago
