Results for "Scalpel"
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List of Bioinformatics Software Tools for Next Generation Sequencing
...ing data”; Bayesian genotype likelihood model Input: BED or VCF files from GATK Output: two VCF files (one for SNVs, one for Indels) Scalpel Description: Used for dete...2906 days ago
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- ...eration sequencing data sets. Scalpel, which is open source and ava...s. Like other indel callers, Scalpel works by performing de novo&n...error in indel calling. When Scalpel assembles an exon, it collect...a 77% true positive rate for Scalpel calls, dramatically better th...
3544 days ago
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- A team from Cold Spring Harbor Laboratory has released an algorithm, called Scalpel, for finding insertions and deletions in next generation sequencing data sets. Scalpel, which is open source and available for download on SourceForge, outperformed the popular tools GATK HaplotypeCaller and ...
Tags: Bioinformatics, Scalpel, Genetic, Variants, Discovery, Tool
3544 days ago
