Results for "Scoring"
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Comment on "AutoDock Vina: an open-source program for doing molecular docking."
QVina-W, a new docking tool particularly useful for wide search space, especially for blind docking. QVina-W utilizes the powerful scoring function of AutoDock Vina, the accelerated search of QVina 2, and adds thorough search for wide search space. https://qvina.github.io/1436 days ago
Comment on "LAMSA: fast split read alignment with long approximate matches"
...gger a bwt-based query. [300] -k --bwt-kmer [INT] Length of BWT-seed. [19] -f --fastest Use GEM-mapper's fastest mode(--fast-mapping=0). [false] Scoring options: -m --match-sc [INT]...2136 days ago
Comment on "GraphMap - A highly sensitive and accurate mapper for long, error-prone reads"
...for very high error rates). [false] --min-bin-perc FLT Consider only bins with counts above FLT * max_bin, where max_bin is the count of the top scoring bin. [0.75] --bin-step FLT Af...2306 days ago
Comment on "Bioinformatics Algorithm Demonstrations and Tutorials"
The FindMotif.pl program uses position-specific scoring matrices to search for sequences similar to a consensus sequence. Find more at http://www.people.vcu.edu/~elhaij/IntroBioinf/Notes/PSSM-Perl.html3650 days ago
