Results for "Sequence"
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Motif based sequence analysis suits The MEME Sui...of unaligned nucleotide or protein sequences, and to perform a wide varie...d analysis of DNA, RNA and protein sequences. It provides motif discovery...Suite provides tools for scanning sequences for matches to motifs (FIMO,...2699 days ago
Prodigal (Prokaryotic Dynamic Programming Genefinding Algorithm)
...Metagenomic Version: Prodigal can run in metagenomic mode and analyze sequences even when the organism is un...own. Ease of Use: Prodigal can be run in one step on a single genomic sequence or on a draft genome containi...2693 days ago
- ...ASEQ assembles paired-end Illumina reads into sequences, trying to correct for error...nding residues), they can be removed from the sequence during assembly. The final se...ove the threshold and discard the ends of the sequence, including the primer.2.Pick...
2668 days ago
FSA: Fast Statistical Alignment
...omologous protein, RNA or DNA sequences. Much as distance-based phyl...This is made possible by the sequence annealing technique for const...such as aligning thousands of sequences or megabase-long sequences....A can quickly align very long sequences using the "anchor annealing"...2654 days ago
- ...ed to rapidly contiguate (align, order, orientate) , visualize and design primers to close gaps on shotgun assembled contigs based on a reference sequence. It uses MUMmer to find align...
2644 days ago
- ...Features: Images show similarity between a central reference sequence and other sequences as concentric rings. BRIG w...ead-mapping files enabling genomic regions present in unassembled sequence data from multiple samples to...
2644 days ago
- ...zing, parsing and visualizing the genome wide sequence comparison results derived fr...compare, parsing and visualize large genomic sequences, especially closely related...-strains. In addition, it can also show other sequence features like repeat sequence...
2643 days ago
- ...sembl database project to import sequence and annotation information fr...tionally import their own custom sequence and annotation data. Individu...ls. Ensembl-derived and imported sequences can be analyzed by using a s...able to compactly display cross-sequence comparisons. This provides th...
2643 days ago
DAGchainer: Computing Chains of Syntenic Genes in Complete Genomes
The DAGchainer software computes chains of syntenic genes found within complete genome sequences. As input, DAGchainer accepts a list of gene pairs with sequence homology along with their genome coordinates. Using a s...2643 days ago
Strand Life Sciences announces the release of Strand NGS v3.1 at ASHG 2017
...science informatics innovation company. Founded in 2000, Strand is a leader in technology innovations for healthcare using genomics. By enhancing sequence-based diagnostics and clinica...2395 days ago
