Python script for basic stats of the assembled genome !
...'genome_assembly.fasta' # Variables for computing statistics total_length = 0 num_contigs = 0 contig_lengths = [] # Iterate through each sequence in the assembly for record i...99 days ago
Python script to convert fastq to fasta
...file header = fq.readline().strip() sequence = fq.readline().strip()...fa.write('>' + header[1:] + '\n') fa.write(sequence + '\n') # Usage example f...44 days ago
Python script to finds extact similar sequence between two multi fasta files !
...esult_handle: fields = line.strip().split('\t') qseq = fields[0] # Extract the aligned query sequence (qseq) #print("Aligned Query Sequence:", qseq) # Print...8 days ago