3928 days ago
Next Generation Sequencing (NGS) Tutorials
...nce.co.uk/blog/2009/04/basics-sequencing-dna-part-1/ http://www.genet...nbt.2134 NARWHAL, a primary analysis pipeline for NGS data http://bioinformatics.oxfordj...ract WEP: a high-performance analysis pipeline for whole-exome data http://www.biomedcentral.com...3507 days ago
Bioinformatics Algorithm Demonstrations and Tutorials
Abstract This project presents demonstrations of selected co...(used in phylogenetic studies and microarray analysis of gene expression), a Na...fier for simulated microarray gene expression data, and a simple Neural Network. The...3724 days ago
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RNA Sequencing Helps Identify Functional Variants from GWAS
For Alzheimer’s and other complex disorders, mining the genome for disease-associated...rted last month in Nature and its associated journals, advances in high-throughput RNA sequenci...3836 days ago
Public Databases for Bioinformatics !
...a will never be deleted most analysis should be performed here...y backed up ) intermediate analysis products that would be ha...n def write( self, data ): self.lock.acquire()...use case 3 we used the ENCODE datasets https://www.encodeprojec...1159 days ago
Bioinformatics software for biologists in the genomics era
...with fast-declining, per-base sequencing costs, this influx of DNA sequence data has encouraged laboratory scientists to engage large datasets in comparative sequence a...ucture often employed for the analysis of large numbers of genes...s when analyzing genome scale datasets.3806 days ago
Encode sequencing data freely available to download and use for academic means
In Encode, regulatory elements investigated via DNA hypersensitivity assays, assays of...interact with DNA, including modified histones and transcription factors, followed by sequenci...3725 days ago