GraphMap - A highly sensitive and accurate mapper for long, error-prone reads
GraphMap - A highly sensitive and accurate mapper for long, error-prone reads http://www.nature.com/ncomms/2016/16041...ry high sensitivity and precision across different error profiles, rates and sequencing...2539 days ago
GeneProf: analysis of high-throughput sequencing experiment
GeneProf is a web-based, graphical software suite that allows users to analyse data produced using high-throughput sequencing platforms (RNA-seq and ChIP-seq; "Next-Generation Sequencing" or NGS): Next-gen analysis f...sp;fully analyzed next-generation sequencing...2510 days ago
2506 days ago
CrocoBLAST: Optimized parallel implementation of local sequence alignment algorithms
Local sequence alignment is a cornerstone of bioinformatics, allowing to compare the amino-acid sequences...informatics packages. However, with the advent of Next Generation Sequencing (NGS) and the development of new sequencing...2491 days ago
2490 days ago
Web Apollo: a web-based genomic annotation editing platform
...omic annotation editor available on the web. One of the natural consequences following from current advances in sequencing technology is that there are more and more researchers sequencing new genomes. These researcher...2488 days ago
QuorUM: An Error Corrector for Illumina Reads
Illumina Sequencing data can provide high coverage of a genome by relatively short (most often 100 bp to 150 bp) read...ds. However, there is enough information in the reads to correct most of the sequencing...2384 days ago
Taxoblast : Taxoblast is a pipeline to identify contamination in genomic sequence
Modern genome sequencing strategies are highly sensitive to contamination making the detection of foreign DNA sequences an important part of analysis pipelines. Here we u...2370 days ago
TULIP - The Uncorrected Long read Itegration Pipeline
#Running TULIP (The Uncorrected Long-read Integration Process), version 0.4 late 2016 (European eel) TULIP currently...seeds, and outputs a graph and scaffold structures. Tulipbulb adds long read sequencing...2370 days ago
poRe: an R package for the visualization and analysis of nanopore sequencing data
...: The Oxford Nanopore MinION device represents a unique sequencing technology. As a mobile sequencing device powered by the USB por...anipulate, organize, summarize and visualize MinION nanopore sequencing data. As a package for R, poR...2370 days ago