BIMA V3: an aligner customized for mate pair library sequencing
Summary: Mate pair library sequencing is an effective and economical method for detecting genomic structural variants...more accurate than popular NGS alignment programs when processing mate pair sequencing...2713 days ago
e-RGA: enhanced Reference Guided Assembly of Complex Genomes
Next Generation Sequencing has totally changed genomics: we are able to produce huge amounts of data at an incredibly low cost compared to Sanger sequencing...2709 days ago
GARM:Genome Assembly, Reconciliation and Merging
The pipeline is based mainly implemented using Perl scripts and modules and third-party open source software like the...s contigs or scaffolds from different assemblers using the same or different sequencing...2709 days ago
GAM-NGS: genomic assemblies merger for next generation sequencing
GAM-NGS (Genomic Assemblies Merger for Next Generation Sequencing), whose primary goal is to merge two or more assemblies in order to enhance contiguity and correctness of both. GAM-...2709 days ago
MeGAMerge: A tool to merge assembled contigs, long reads from metagenomic sequencing runs
MeGAMerge MeGAMerge (A tool to merge assembled contigs, long reads from metagenomic sequencing runs) Description MeGAMerge is a perl based wrapper/tool that can accept any number of sequence (FA...2709 days ago
TMAP - torrent mapping alignment program General Notes
TMAP - torrent mapping alignment program General Notes TMAP is a fast and accurate alignment software for short and long nucleotide sequences produced by next-generation sequencing...2604 days ago
2649 days ago
ConPADE: Genome Assembly Ploidy Estimation from Next-Generation Sequencing Data
ConPADE (Contig Ploidy and Allele Dosage Estimation), a probabilistic method that estimates the ploid...ns. In the process, they report findings regarding errors in sequencing. The method can be used for whole genome shotgun (WGS) sequencing...2642 days ago
Strand Life Sciences announces the release of Strand NGS v3.1 at ASHG 2017
...hemes in Strand NGS v3.1 address recent challenges in next generation sequencing (NGS). The first theme is la...nformatics innovation company. Founded in 2000, Strand is a leader in technology innovations for healthcare us...2401 days ago
PBSuite: Software for Long-Read Sequencing Data from PacBio
PBJelly - the genome upgrading tool. PBHoney - the structural variation discovery tool Both are contained w...Fjournal.pone.0047768PBJelly is a highly automated pipeline that aligns long sequencing...2639 days ago