2778 days ago
2778 days ago
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2359 days ago
Maq: Mapping and Assembly with Quality
Maq stands for Mapping and Assembly with Quality It builds assembly by mapping short reads to reference sequences. Maq is a project hosted by SourceForge.net. The project page is a...2735 days ago
2719 days ago
Understanding Greedy Algorithms
Learning greedy algo for biologist. https://www.topcoder.com/community/data-s...p://www.cs.rpi.edu/~magdon/ps/conference/super_biokdd.pdf https://ocw.mit.edu/courses/biology/7-91j-foundations-of-...2715 days ago
E-MEM: Efficient computation of Maximal Exact Matches
E-MEM is a C++/OpenMP program designed to efficiently compute MEMs between large genomes. See the README file for instructions on how to use E-MEM. E-MEM source co...2712 days ago
e-RGA: enhanced Reference Guided Assembly of Complex Genomes
Next Generation Sequencing has totally changed genomics: we are able to produce huge amounts of data at an incredi...efforts to design tools able to assemble, de novo, an organism sequenced with short r...2708 days ago
2708 days ago