2706 days ago
2703 days ago
Prodigal (Prokaryotic Dynamic Programming Genefinding Algorithm)
...: Prodigal can run in metagenomic mode and analyze sequences even when the organism is unknown. Ease of Use: Prodigal can be run in one step on a single genomic sequence or on a draf...2685 days ago
2618 days ago
Modular, efficient and constant-memory single-cell RNA-seq preprocessing
...ss count matrix Perform RNA velocity and single-nuclei RNA-seq analsis Quant...tags, and Perturb-seq. Obtain QC reports from single-cell RNA-seq data The ...; Modular and efficient pre-processing of single-cell RNA-seq, Nature Biotechn...1127 days ago
2663 days ago
2660 days ago
Many-Core Engine (MCE) for Perl example
...upporting threads and processes. MCE::Queue Provides a hybrid queuing implementation for MCE supporting normal queues and priority queues from a single module. MCE::Queue exchanges...2652 days ago
DAGchainer: Computing Chains of Syntenic Genes in Complete Genomes
...arge evolutionary conserved regions of genomes between two organisms. Alternatively, by examining colinear sets of homologous genes found within a single genome, segmental genome dupl...2634 days ago
Strand Life Sciences announces the release of Strand NGS v3.1 at ASHG 2017
...es, UMI support in DNA-Seq enables the detection of somatic variants at low concentrations. In RNA-Seq, large-scale and UMI support can be used in single-cell-based studies that revea...2387 days ago