Prodigal (Prokaryotic Dynamic Programming Genefinding Algorithm)
Prodigal (Prokaryotic Dynamic Programming Genefinding Algorithm) is a microbial...en when the organism is unknown. Ease of Use: Prodigal can be run in one step on a single genomi...2696 days ago
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Modular, efficient and constant-memory single-cell RNA-seq preprocessing
With kallisto | bustools you can Generate a cell x gene&nb...;count matrix Perform RNA velocity and single-nuclei RNA-seq analsis Quant...nd Perturb-seq. Obtain QC reports from single-cel...Modular and efficient pre-processing of single-cell R...1138 days ago
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Many-Core Engine (MCE) for Perl example
MCE spawns a pool of workers and therefore does not fork a new process per each element of dat...queuing implementation for MCE supporting normal queues and priority queues from a single module...2663 days ago
TMAP - torrent mapping alignment program General Notes
TMAP - torrent mapping alignment program General Notes TMAP is a fast and accurate alignment software for short and long nucleotide se...2602 days ago
DAGchainer: Computing Chains of Syntenic Genes in Complete Genomes
The DAGchainer software computes chains of syntenic genes found within complete genome sequenc...nisms. Alternatively, by examining colinear sets of homologous genes found within a single genome...2646 days ago
Strand Life Sciences announces the release of Strand NGS v3.1 at ASHG 2017
Strand Life Sciences announces the release of Strand NGS v3.1 at ASHG 2017 ORLANDO, USA, Oct...iants at low concentrations. In RNA-Seq, large-scale and UMI support can be used in single-cell-b...2398 days ago