2557 days ago
A Post-assembly genome-improvement toolkit (PAGIT) to obtain annotated genomes from contigs
PAGIT addresses the need for software to generate high quality draft genomes. It is based on a series of pro...or an earlier assembly, onto the latest assembly. PAGIT bundles these software and makes them more accessibl...2547 days ago
CABOG: Celera Assembler with Best Overlap Graph
...est Overlap Graph) is scientific software for DNA research. CABOG...xtension of the Celera Assembler software that was originally developed...draft human genome sequence. The software was released to the public do...ving a jigsaw puzzle. The CABOG software was the first to accomplish m...2544 days ago
ANGES: reconstructing ANcestral GEnomeS maps
This page contains the software ANGES 1.01, that aims at reconstucting ancestral genome maps from homologous markers in extant related genomes. Download Program, version 1.01&n...2541 days ago
Pollux: platform independent error correction of single and mixed genomes
...times more rare than successfully corrected errors. Furthermore, we show that the quality of assemblies improves when reads are corrected by our software. https://bmcbioinformatics.b...2540 days ago
SuRankCo: supervised ranking of contigs in de novo assemblies
SuRankCo is a machine learning based software to score and rank contigs from de novo assemblies of next generation sequencing data. It trains with alignments of contigs with known refe...2535 days ago
Genetic-mapper: SVG Genetic Map Drawer
...ge map in Scalable Vector Graphics (SVG) format. The resulting file can either be submitted for publication and edited with any vectorial drawing software like Inkscape and&n...2510 days ago
GeneProf: analysis of high-throughput sequencing experiment
GeneProf is a web-based, graphical software suite that allows users to analyse data...ing internet connection -- no need to install software! (cp. Section 'System Re...eir own modules and extend GeneProf. Existing software can be easily wrapped in the...2493 days ago
I-PV: Interactive Protein Sequence Visualization
I-PV is a interactive data visualization software designed for inspection of protein sequences and mutation information. It is mainly used for Genetics and Bioinformatics. So what exactly makes it standout? http://i-pv.org/ipv_rec2495 days ago
MOSS: A System for Detecting Software Similarity
Moss (for a Measure Of Software Similarity) is an automatic system for determining the similarity of programs. To date, the main application of Moss has been in detecting plagiaris...2336 days ago