Hidden Markov Models, Viterbi Algorithm, Markov Chain Exploration with script
Hidden Markov Models, the Viterbi Algorithm, and CpG Islands (in VB6) Problem : The CG island is a stretch of DNA...erstanding of HMM read this excellent tutorial http://www.cs.ubc.ca/~murphyk/Software/HM...3838 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...:644 - 652, 2011. PubMed [The software is called Trinity, and is ava...edCentral [describes the RSEM software package] Comparing genomes a...6(5):e19379, 2011. Full Text Development of high-density genetic ma...-configured with a variety of software tools installed and ready to use...3792 days ago
List of bioinformatics open source projects/software.
Open source software is software that can be freely used, changed, a...he OS bioinformatics projects/software : .NET Bio http://blogs.msd...ia.biology.virginia.edu/WuLab/Software.html Metagenomics analysis s...ility between systems biology software Galaxy http://galaxyproject...3770 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
...://genfaculty.rutgers.edu/hey/software#fpgFREGENE FREGENE is a C++ p...enomeSIMLA is currently under development- however, we have a beta r...son/mbs modifying Hudson's ms software to generate samples of DNA se...http://mlemire.freeshell.org/software.htmlTreesimJ A flexible, forward...3750 days ago
List of In-silico Binding Site Prediction Tools
...ation and residue selection. The software provided can easily be integr...tested. CONCLUSIONS: The FunFOLD software is freely available as both a...line driven program. A GUI is in development and mdpocket (fpocket on m...http://www.caver.cz/ CAVER is a software tool for analysis and visualizat...3757 days ago
Linux for bioinformatician !!!
Linux, free operating system for computers, provides several powerful admin tools and utilities which will help you...ase. The field of bioinformatics relies heavily on Linux-based computers and software. A...3718 days ago
Next generation sequencing in R or bioconductor environment
There are many R software and bioconductor packages for NGS data analysis, some of them...collection of databases implementing the BioMart software suite (http:// www.biomart.or...s the analysis of splice junctions. The following software su...3637 days ago
Commercial and public next-gen-seq (NGS) software
...data. Commercial next-gen-seq software that extends the CLCbio Main Workbench software. Includes SNP detection, CHiP...h Lasergene Sequence Analysis software for additional analysis and v.... SWIFT - The SWIFT suit is a software collection for fast index-bas...France. MapNext - MapNext: A software to...3532 days ago
List of Biotechnology Research Laboratory, University, and Centre in India
...of Science, Technology & Development Studies, New Delhi NPL - Na...search Defence Research and Development Organisation Directorate of...esearch National Centre for Software Technology Society for Applied...formation Centre Centre for Development of Advanced Computing Inter...2584 days ago
Software packages for next gen sequence analysis
...data. Commercial next-gen-seq software that extends the CLCbio Main Workbench software. Includes SNP detection, CHiP...S. * SeqMan Genome Analyser - Software for Next Generation sequence...* SWIFT - The SWIFT suit is a software collection for fast index-bas...rance. * MapNext - MapNext: A software to...3255 days ago