Results for "Sort"
Blogs
Computer simulation of genetic mechanism !!
...the execution output. Simulation embodies the principle of ``learning by doing'' --- to learn about the system we must first build a model of some sort and then operate the model. T...2980 days ago
BBTools for bioinformatician !
...rs that occurred at least 10 times, in a 2-column format that is easy to sort in Excel. Code: ACC...Calculating coverage of the genome Program will take sam or bam, sorted or unsorted. Code: $ pi...2275 days ago
- ...treated as a file handle, for purposes of I/O. This makes # it feel sort of like shell scripting, but...want to do with it. # Here's a quick example of a simple script, the sort of thing AWK is perfect # fo...
1840 days ago
Perl one-liner for beginners !
... '@F = split("\t", $_); print "$F[1]";' columnFileWithTabs.txt > justSecondColumn.txt One-Liner: Sort lines by their length perl -e 'print sort {length $a <=> length $...1386 days ago
Illumina based assembly pipeline steps !
...tQ files (cat) Read QC (FastQC) Adapter trimming (fastp) Removal of host reads (Kraken 2; optional) Variant calling Read alignment (Bowtie 2) Sort and index alignments (SAMtool...882 days ago
