BOL

Results for "Sort"

Wire posts

• • Rahul Nayak@rahul

  

  Sort FASTA sequence by length: cat f1.fasta| awk '{if($0 ~ /^>/){printf "%st", $0}else{print length($0)"t"$0}}'| sort -k2n,2| awk '{print $1"n"$3}' > sequence.fasta #Sort #Fasta #Trick #Onliner

  3193 days ago

• • Rahul Nayak@rahul

  

  Display top 10 Mrmory resource intensive processes in order $ line=$(ps aux | head -n 1) && echo $line; ps aux | sort -nrk 5 | head #Display #Top10 #Memory #Processes #Linux #Trick

  3167 days ago

• • Jit@jit.aber

  

  Check if BAM file is sorted or not use: for F in `find . -name "*.bam"`; do echo $F; samtools index ${F} ; done #Sort #BAM #Trick

  2874 days ago

• • Jit@jit.aber

  

  Sort a file with column 2: sort -g -k 2,2 allPacbio.fa.fai > sorted.fai #sort #file #column

  2374 days ago

• • Rahul Nayak@rahul

  

  Get unique ids from column 1 in Linux. $ cat output_file | cut -f 1 | sort | uniq > allUniqOUT #Unique #Linux #Cut

  2143 days ago

• • Hardeep Kaur@hardeep

  

  sort -k2 -n genome.fa #Sort #Column2 #Bash

  2121 days ago

• • Rahul Nayak@rahul

  

  du -sh * | sort | grep "G" #List size of all the directory #Size #List #Directory #Linux

  2104 days ago

• • Jit@jit.aber

  

  samtools view -Sb pilonCor_round1.fasta.out.sam | samtools sort -m 4G -@ 40 -o pilonCor_round1.fasta.out.sorted.bam - && samtools index -@ 40 pilonCor_round1.fasta.out.sorted.bam #SAM2BAM

  1920 days ago

• • Jit@jit.aber

  

  The command du "summarizes disk usage of each FILE, recursively for directories," e.g., du -h | sort -h #Disk #Usage #Linux

  1860 days ago

• • Rahul Agarwal@raag

  

  Many bioinformatics position available at germany #https://www.jobvector.de/en/search-jobs.html?keywords=bioinformatics&locations=&distance=50&sort=_score&_pn=1

  1781 days ago

• « Previous
• 1
• 2
• Next »