Results for "Statistical Data Analysis"
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This is a collection of libraries and hig...ser scripts for bioinformatic analysis, including working with gene annotation, collecting data scores from a variety of mode...formats and the collection of data from multiple data files. The...cludes scripts for setting up databases of annotation, collecting an...3012 days ago
- Stacks is a software pipeline for building loci from short-read sequences, such as those generated on the Illumina platform. Stacks was developed to work with restriction enzyme-based data, su...
3007 days ago
Ensembl comparative genomics resources
...omprehensive and reproducible analysis of chordate genome data. Ensembl computes pairwise an...nformatics infrastructure and data presentation across all suppo...is extensively reused for the analysis of non-vertebrate species by...produce reference comparative data and make it freely available. Da...3002 days ago
- This software is designed to identify both simple and complex rearrangements from paired-end sequencing data. Us...
3001 days ago
- Machine Learning in Python Simple and efficient tools for data mining and data analysis Accessible to everybody, and reusable in various contexts Built on NumPy, SciPy, and matplotlib Open source, commercially usable - BSD license More at http://scikit-learn.org/stable/index.html
3001 days ago
- Ultrafast and accurate nucleotide-resolution analysis of structural variants More at http://bioinform.github.io/breakseq2/ Download BreakSeq2 Latest version: https://github.com/bioinform/b...
3001 days ago
- LAST can: Handle big sequence data, e.g: Compare two vertebrate genomes Align billions of DNA reads to a gen...e Indicate the reliability of each aligned column. Use sequence quality data pro...
2993 days ago
- GA4GH Data Working Group Led by David Haussler (UCSC) and Richard Durbin (Sanger Institute), the Data Working Group (DWG) of the Gl...acy respecting and interoperable sharing of Genomic data. M...
2981 days ago
RNA-Seq De novo Assembly Using Trinity
Trinity, developed at the Broad Institute and the Hebrew Univers...f transcriptomes from RNA-seq data. Trinity combines three indep...inity partitions the sequence data into many individual de Bruij...nchworm assembles the RNA-seq data into the unique sequences of...directory. Assemble RNA-Seq data lik...2979 days ago
