Commercial and public next-gen-seq (NGS) software
...ory. Uses a Burrows-Wheeler-Transformed (BWT) index. Link to discussion thread here. Written by Ben Langmead...; http://dir.nhlbi.nih.gov/papers/lmi/epigenomes/sissrs/ See also this thread for ChIP-Seq, until I get tim...3657 days ago
Software packages for next gen sequence analysis
...ory. Uses a Burrows-Wheeler-Transformed (BWT) index. Link to discussion thread here. Written by Ben Langmead...Sequence Reads. BED file input. Raja Jothi @ NIH. Perl. **See also this thread for ChIP-Seq, until I get tim...3381 days ago
2852 days ago
Ancestral sequence reconstruction steps !
...st following steps? 1- Alignments "Mafft - http://mafft.cbrc.jp/alignment/software/source.html" mafft --maxiterate 1000 --reorder --thread 24 --genafpair Dataset.fasta...2317 days ago
LINKS scaffolder bloomfilter setting !
...oomFilter_wrap.cxx -I/home/urbe/anaconda3/lib/perl5/5.22.0/x86_64-linux-thread-multi/CORE/ -fPIC -Dbool=char...oomFilter_wrap.cxx -I/home/urbe/anaconda3/lib/perl5/5.22.0/x86_64-linux-thread-multi/CORE/ -fPIC -Dbool=char...2289 days ago