BOL: Results for "Threshold"

Results for "Threshold"

- BioStar@biostar
Comment on "Basic command-line to run BLAST"
...parameters: BLAST has many different parameters that can be adjusted to customize the search. The most important parameters include the e-value threshold, the word size, and the gap p...
475 days ago
- Jit@jit.aber
Comment on "MashMap: a fast and approximate software for mapping long reads (PacBio/ONT) or assembly to reference genome(s)"
...e ignored --noSplit disable splitting of input sequences during mapping [enabled by default] --perc_identity <value>, --pi <value> threshold for identity [default : 85]...
2174 days ago
- Jit@jit.aber
Comment on "Basic command-line to run BLAST"
...qcovs bitscore' -max_target_seqs 1 -num_threads 40 -qcov_hsp_perc 90 -threshold 90 -ungapped -comp_based_stat...qcovs bitscore' -max_target_seqs 1 -num_threads 40 -qcov_hsp_perc 90 -threshold 90 -ungapped -comp_based_stat...
2296 days ago
- Jit@jit.aber
Comment on "GraphMap - A highly sensitive and accurate mapper for long, error-prone reads"
...r the DP alignment. Ignored for Myers alignment. [6] -z, --evalue FLT Threshold for E-value. If E-value >...nmapped. If FLT < 0.0, thredhold not applied. [1e0] -c, --mapq INT Threshold for mapping quality. If mapq...
2344 days ago
- Jit@jit.aber
Comment on "Platanus"
...r of link (default 3) Platanus first estimates the threshold of link (number) and makes scaffolds, then decreases the threshold to INT and...
2850 days ago