Prodigal (Prokaryotic Dynamic Programming Genefinding Algorithm)
...ta set (except those containing introns). It possesses a very sophisticated ribosomal binding site scoring system that enables it to locate the translation initiation site with great ac...2694 days ago
DFAST: a flexible prokaryotic genome annotation pipeline for faster genome publication
...ommand-line program. The new engine can annotate a typical-sized bacterial genome within 10 minutes, with rich information such as pseudogenes, translation exceptions, and orthologous g...2374 days ago
BLAST options, setting and defaults
...lt = DUST default = SEG default = SEG default = SEG default = SEG default = DUST Query genetic code:genetic code to be used in BLASTX translation of the query n/a n/a defau...1983 days ago
MACSE: Multiple Alignment of Coding SEquences Accounting for Frameshifts and Stop Codons
MACSE aligns coding NT sequences with respect to their AA translation while allowing NT sequences to contain multiple frameshifts and/or stop codons. MACSE is hence the first automatic...1913 days ago
Genome in a Bottle (GIAB) Consortium
...ademic consortium hosted by NIST to develop the technical infrastructure (reference standards, reference methods, and reference data) to enable translation of whole human genome sequenc...1571 days ago
692 days ago