2146 days ago
Strand Life Sciences announces the release of Strand NGS v3.1 at ASHG 2017
...detection of somatic variants at low concentrations. In RNA-Seq, large-scale and UMI support can be used in single-cell-based studies that reveal tumor-cell heterogeneity, even at l...2378 days ago
2276 days ago
2161 days ago
PureCN: copy number calling and SNV classification using targeted short read sequencing
This package estimates tumor purity, copy number, and loss of heterozygosity (LOH), and classifies sin...somatic variant detection and copy number pipelines, and has support for tumor samples without matching norm...2088 days ago
Severus: a somatic structural variation (SV) caller for long reads
Severus is a somatic structural variation (SV) caller for long reads (both PacBio and ONT). It is designed for matching tumor/normal analysis, supports multiple tumor samples, and produces accurate and c...27 days ago