fineSTRUCTURE v2 & GLOBETROTTER
Software available at this site FineSTRUCTURE version 2, a pipeline for running ChromoPainter and FineSTRUCTURE for population inference. A GUI is available for...2635 days ago
2631 days ago
LoRDEC: a hybrid error correction program for long, PacBio reads
...aligning them to the contigs of an assembly, etc. Why is LoRDEC different? It is efficient and can process large read data sets, included from eukaryotic or vertebrate species,...2579 days ago
2579 days ago
Barrnap: Bacterial ribosomal RNA predictor
...p predicts the location of ribosomal RNA genes in genomes. It supports bacteria (5S,23S,16S), archaea (5S,5.8S,23S,16S), mitochondria (12S,16S) and eukaryotes (5S,5.8S,28S,18S). It...2547 days ago
A Post-assembly genome-improvement toolkit (PAGIT) to obtain annotated genomes from contigs
PAGIT addresses the need for software to generate high quality draft genomes. It is based on a series of programs that we developed: ABACAS, that is able to contigua...2547 days ago
Synteny Portal: a web-based application portal for synteny block analysis
...genomics studies by compensating limitations of existing tools. Synteny Portal is freely available at http://bioinfo.konkuk.ac.kr/synteny_portal. http://bioinfo.konkuk.ac.kr/synteny_portal/2535 days ago
Genetic-mapper: SVG Genetic Map Drawer
Genetic-mapper is a perl script able to draw publication-ready vectorial genetic maps. Perl script for creating a publication-ready vectorial genetic/linkage map in...2510 days ago
DarkHorse: a method for genome-wide prediction of horizontal gene transfer
...ognizing orthologous sequences that may have been previously overlooked or unavailable. These features are demonstrated in bacterial, archaeal, and eukaryotic examples.2506 days ago
2499 days ago