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3940 days ago
3940 days ago
3936 days ago
Bioinformatics Courses Around the World
Bioinformatics Courses around the world Here is the list...), BS5072 (bioinformatics II), BS6220 (theory and algorithms in bioinformatics), BS5092 (...edge of the new genomes, two-day course, TBA algorithm design, one-week course, TBA&...3937 days ago
Hidden Markov Models, Viterbi Algorithm, Markov Chain Exploration with script
Hidden Markov Models, the Viterbi Algorithm, and CpG Islands (in VB6) Problem : Th...annerhelland.com/1187/hidden-markov-models-viterbi-algorithm-cpg-islands-in-vb6/ Fore det....ubc.ca/~murphyk/Software/HMM/labman2.pdf Viterbi Algo at http://en.wikipedia.org...3818 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
List of generic simulation software/tools/resource wit...RS was designed to benchmark RNA-Seq alignment algorithms and also algorithms that aim to reconstruct diff...orwSim The program given below is based on the algorithm described in Padhukasahasram...3731 days ago
List of In-silico Binding Site Prediction Tools
...we utilize the Smith-Waterman algorithm to footprint an unbound pocke...erred binding sites, the IBIS algorithm clusters binding sites formed...bis.cmm.ki.si/index.php algorithm for detection of structurally...ein pocket (cavity) detection algorithm based on Voronoi tessellation...3738 days ago
Next generation sequencing in R or bioconductor environment
...g containers, string matching algorithms, and other utilities, for fa...tion factor binding site. The algorithm extends the popular motif dis...in some part of the list. The algorithm was developed for detecting t...in ChIP-Seq experiments. Its algorithm uses hidden Markov models (HM...3618 days ago
Commercial and public next-gen-seq (NGS) software
Integrated solutions CLCbio Genomics Workben...alignments using the Smith-Waterman algorithm. Features a number of support...umina reads. Uses a Needleman-Wunsch algorithm. Can support Bis-Seq. Commerc...EQAN - A Consistency-based Consensus Algorithm for De Novo and Reference-gui...3513 days ago