dbCAN: a web server and DataBase for automated Carbohydrate-active enzyme ANnotation
dbCAN is a web server and DataBase for automated Carbohydrate-active enzyme ANnotation, funded by the BioEnergy Science Center of the DOE. Similar resources on the web include CAZy database and CAT. All data in dbCAN are generated based on the family c...Tags: dbCAN, web, server, DataBase, automated, Carbohydrate, active, enzyme, ANnotation
2532 days ago
Mobyle: a new full web bioinformatics framework
Mobyle, to provide a flexible and usable Web environment for defining and running bioinformatics analyses. It embeds simple yet powerful data management features that allow the user to reproduce analyses and to combine tools using a hierarchical typing system. Mobyle offers invocation of services...Tags: Mobyle, full, web, bioinformatics, framework
2308 days ago
mojolicious: a next generation web framework for the Perl programming language.
Back in the early days of the web, many people learned Perl because of a wonderful Perl library called CGI. It was simple enough to get started without knowing much about the language and powerful enough to keep you going, learning by doing was much fun. While most of the techniques used are...Tags: mojolicious, next generation, web, framework, Perl, programming, language
2303 days ago
Tags: BioCircos.js, open, source, interactive, Javascript, library, interactive, display, biological, data, web
2296 days ago
Bokeh: An interactive visualization library that targets modern web browsers for presentation
Bokeh is an interactive visualization library that targets modern web browsers for presentation. Its goal is to provide elegant, concise construction of versatile graphics, and to extend this capability with high-performance interactivity over very large or streaming datasets. Bokeh can help anyo...Tags: Bokeh, interactive, visualization, library, targets, modern, web, browsers, presentation
2093 days ago
Heatmapper: web-enabled heat mapping for all
Heatmapper is a freely available web server that allows users to interactively visualize their data in the form of heat maps through an easy-to-use graphical interface. Heatmapper is a versatile tool that allows users to easily create a wide variety of heat maps for many different data types and ...Tags: Heatmapper, web-enabled, web, heat, map, mapping, all, online, tool
2042 days ago
KOBAS: a web server for gene/protein functional annotation and functional gene set enrichment
KOBAS 3.0 is a web server for gene/protein functional annotation (Annotate module) and functional gene set enrichment(Enrichment module). For Annotate module, it accepts gene list as input, including IDs or sequences, and generates annotations for each gene based on multiple databases about ...Tags: KOBAS, web, server, gene, protein, functional, annotation, functional, gene, set, enrichment, KEGG
2024 days ago
ANItools web: a web tool for fast genome comparison within multiple bacterial strains
ANItools is a software package written by PERL scripts that can be run in a Linux/Unix system. If you want to compare bacterial genomes and calculate their average nucleotide identity (ANI), you could download and run this program directly. Or you could send us the genome sequence by email. Then ...Tags: ANItools, web, tool, fast, genome, comparison, multiple, bacterial, strains
1998 days ago
Tags: raghavagps, gpsrdocker, docker-based, container, software, web, servers, developed, bioinformatics
1966 days ago
BUSCA: an integrative web server to predict subcellular localization of proteins
BUSCA (Bologna Unified Subcellular Component Annotator) is a web-server for predicting protein subcellular localization. BUSCA integrates different tools to predict localization-related protein features (DeepSig, TPpred3, PredGPI and ENSEMBLE3.0) as well as tools for discriminating subcellular lo...Tags: BUSCA, integrative, web, server, predict, subcellular, localization, proteins
1912 days ago