Results for "WhatsHap"
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WhatsHap: fast and accurate read-based phasing
WhatsHap is a software for phasing genomic variants using DNA sequencing reads, also called read-based phasing or haplotype assembly. It is especially suitable for long reads, but works also well with short reads. Features Very accurate results (Martin et al., WhatsHap: fast and accu...Tags: WhatsHap, fast, accurate, read-based, phasing
2175 days ago
pWhatsHap: a parallel, high-performance version of WhatsHap
Given the potential relevance of efficient haplotyping in several analysis pipelines, we have designed and engineered pWhatsHap, a parallel, high-performance version of WhatsHap. pWhatsHap is embedded in a toolkit developed in Python and supports genomics datasets in standar...Tags: pWhatsHap, parallel, high-performance, WhatsHap, Phasing, Phase, Genome, Alles, Haplotype
2005 days ago
UnicodeDecodeError: 'utf-8' codec can't decode byte 0x8b in position 1: invalid start byte
whatshap phase -o seeWhat.vcf --reference genome.fa see.vcf genome.fa.sorted.bam This is WhatsHap 0.17 running under Python 3.6.6Traceback (most recent call last): File "/home/anaconda3/bin/whatshap", line 11, in <module> load_entry_point('whatshap==0.17', 'console_scripts', 'whatshap')(...Tags: whatshap, error, invalid, file
2024 days ago
