Results for "approximate"
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Bioinformatics Algorithm Demonstrations and Tutorials
...perience. The algorithms demonstrated include two approaches to approximate string matching (dynamic programming and Shift-AND numeric approximate matching), Hierarchical Clust...3698 days ago
- MashMap is a fast and approximate software for mapping long reads (PacBio/ONT) or assembly to reference genome(s). It maps a query sequence against a reference region if and only if...
2329 days ago
NGMLR: long-read mapper designed to align PacBio or Oxford Nanopore
...to quickly and correctly align the reads, including those spanning (complex) structural variations. Ngmlr uses an SV aware k-mer search to find approximate mapping locations for a read...2196 days ago
MCMCTREE: a phylogenetic program for Bayesian estimation of species divergence times
...rial I will analyze an easy example modified from dataset of Inoue et al. (2010). Here we conduct a commonly used time estimation method, "Approximate Likelihood Method", for the d...2158 days ago
LAMSA: fast split read alignment with long approximate matches
LAMSA (Long Approximate Matches-based Split Aligner) is a novel split alignment approach with faster speed and good ability of handling SV events. It is well-suited to align lo...2176 days ago
