Comment on "Estimate Genome Size"
...counts_0.histo # generate a pdf graph of the histogram jellyplot.pl fastq.counts_0.histo # look at fastq.counts_0.histo.pdf and identify the approximate peak # use find_valleys.pl t...1891 days ago
2116 days ago
Comment on "GraphMap - A highly sensitive and accurate mapper for long, error-prone reads"
...kmer size. [6] -l INT Number of edges per vertex. [9] -A, --minbases INT Minimum number of match bases in an anchor. [12] -e, --error-rate FLT Approximate error rate of the input read...2286 days ago
Comment on "Bioinformatics Algorithm Demonstrations and Tutorials"
Approximate Matching with Suffix Trees http://homepage.usask.ca/~ctl271/810/approximate_matching.shtml3800 days ago