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Results for "basecall"

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• • Jit@jit.aber

  

  Katuali is a flexible consensus pipeline implemented in Snakemake to basecall, assemble, and polish Oxford Nanopore Technologies' sequencing data

  Run a pipeline processing fast5s to a consensus in a single command. Recommended fixed "standard" and "fast" pipelines. Interchange basecaller, assembler, and consensus components...

  1939 days ago

Bio-Scripts

• • Jit@jit.aber

  

  Downloading GATK !

  ...rd) Asserts the validity for specified Illumina basecalling data. CollectIlluminaBasecallingMetrics (Picard) Collects...ard) Classify PF-Failing reads in a HiSeqX Illumina Basecalling directory into various cat...

  2084 days ago

Tags

• • Jit@jit.aber

  

  Katuali is a flexible consensus pipeline implemented in Snakemake to basecall, assemble, and polish Oxford Nanopore Technologies' sequencing data

  Run a pipeline processing fast5s to a consensus in a single command. Recommended fixed "standard" and "fast" pipelines. Interchange basecaller, assembler, and consensus components of the pipelines simply by changing the target filepath. Seemless distribution of tasks over local or distribute...

  Tags: Katuali, flexible, consensus, pipeline, Snakemake, basecall, assemble, polish, Oxford, Nanopore, Technology, sequencing, data

  1939 days ago