Results for "bed"
Top-level pages
List of generic simulation software/tools/resource with brief description and homepage !!!
...genomics. http://egglib.sourceforge.net/EvolSimulator A simulation test bed for hypotheses of genome evol...rch.shtmlForwSim The program given below is based on the algorithm described in Padhukasahasram et al. 200...3730 days ago
Commercial and public next-gen-seq (NGS) software
...on Genome-wide analysis of transcription factor binding sites based on ChIP-Seq data. (C++) SISSRs - Site Identification from Short Sequence Reads. BED file input. Raja Jothi @ NIH....3512 days ago
Software packages for next gen sequence analysis
...Genome-wide analysis of transcription factor binding sites based on ChIP-Seq data. (C++) * SISSRs - Site Identification from Short Sequence Reads. BED file input. Raja Jothi @ NIH....3236 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...Also accepts: FASTA, GFF/GTF/GVF, BED, Wiggle, Cosmic, UCSC variant...HP, CNT, Illumina, Plink PED, TPED, BED, Agilent files, NimbleGen dat...;; Dependent upon- Boost, SAMtools, BEDtools; 3 step workflow Input:...binding; Input: multiple: SGR/TXT, BED, BED6, GFF; if using prealign...2902 days ago
