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Results for "bga"

Blogs

• • Arijit@arijit

  

  BGAgenomicsDB: Acaryochloris marina MBIC11017 - A cyanobacterial organim

  ...database system cyanobacterial organims called bgagenomicsDB. Cyanobacteria or some time called blue gree algee(BGA) is found in almost every ter...Want to know more about this organism visit : bgagenomics.iicb.res.in  ...

  3073 days ago

Wire posts

• • Jit@jit.aber

  

  #Zero coverage regions ~/Tools/bedtools2/bin/bedtools genomecov -ibam PvsH_aln_sorted.bam -bga | awk '$4==0' > ZERO_coverage_regions.txt

  2140 days ago

• • Abhimanyu Singh@abhimanyu

  

  #Intersect your bed data with coverage $ bedtools genomecov -ibam aln.bam -bga | awk '$4==0' | bedtools intersect -a cds.bed -b - -f 1.0

  1994 days ago

Bio-Scripts

• • Neelam Jha@neelam

  

  Genome Covered !

  zero=$(bedtools genomecov -ibam BAM -g hg38.fasta -bga | awk '$4==0 {bpCountZero+=($3-$2)} {print bpCountZero}' | tail -1) nonzero=$(bedtools genomecov -ibam BAM -g hg38.fasta -bga | awk '$4>0 {bpCountNonZero+=($3-$2)} {print bpCountNonZero}' | tail -1) percent=$(bc

  2206 days ago

Tags

• • Arijit@arijit

  

  BGAgenomicsDB: Acaryochloris marina MBIC11017 - A cyanobacterial organim

  We have developed a database system cyanobacterial organims called bgagenomicsDB. Cyanobacteria or some time called blue gree algee(BGA) is found in almost every teristorial .They have application in industrial product, health application, food technology etc.   One of the cyanobacterial or...

  Tags: cyanobacreria, bga, blue green algee, bgagenomics, bgagenomicsdb, Acaryochloris marina MBIC11017, bgagenomicsdb.iicb.res.in

  3073 days ago