Results for "breaks"
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...rations by virtue of the genomic location of CNA-associated chromosomal breaks and identify genes that appea...urrently affected by the genomic location of chromosomal CNA-associated breaks by a genome-wide approach, wh...2167 days ago
- ...with contigs than scaffolds, as scaffolds are often affected by mis-assemblies (no de novo assembler / scaffolder is perfect...), which breaks synteny. pyScaf works very w...
2707 days ago
BAUM – Improving Genome Assembly by Adaptive Unique Mapping and Local Overlap-Layout-Consensus
BAUM, breaks the whole genome into regions by adaptive unique mapping; then the local OLC is used to assemble each region in parallel. BAUM can: (1) perform reference-assi...2032 days ago
PaReBrick: PArallel REarrangements and BReaks identification toolkit
PaReBrick. The tool takes a collection of strains represented as a sequence of oriented synteny blocks and a phylogenetic tree as input data. It identifies rearrangemen...953 days ago
- ...Wavefront Alignment) identifies collinear regions via conserved anchors (full-length CDS and full-length exon have been implemented currently) and breaks collinear regions into shorte...
815 days ago
