Results for "common"

Bio-Scripts

  • Retrieve NCBI GenBank records with a range of accession numbers

    ...tothard@gmail.com) use warnings; use strict; use Getopt::Long; use LWP::Simple; use URI::Escape; use LWP::UserAgent; use HTTP::Request::Common; my %param = ( query...

    2930 days ago

  • Install ATOM editor on Elemantory OS / Ubuntu

    ...gconf-service gconf-service-backend gconf2-common libgconf-2-4 The following N...tom gconf-service gconf-service-backend gconf2-common libgconf-2-4 0 upgraded, 5 n...Selecting previously unselected package gconf2-common. (Reading database ... 19427...

    1190 days ago

  • BASH script for SelfBLAST a genome

    ...g you have blast and samtools installed in your system #Author: Jitendra Narayan #USAGE: ./selfBlast.sh extract #USAGE: ./selfBlast.sh all #Common settings FASTAFILE=MergedCo...

    2666 days ago

  • Plot custom gene density with R

    library(karyoploteR) pp

    2264 days ago

  • Estimate Genome Size with Jellyfish and R

    jellyfish count -t 8 -C -m 19 -s 5G -o 19mer_out --min-qual-char=? /common/Tutorial/Genome_estimation/sample_read_1.fastq /common/Tutorial/Genome_estimation/sample_read_2.fastq #-t -treads=unit32 Nu...

    2261 days ago

  • Fastq-dump for SRA download

    ...--spot-groups Filter by SPOT_GROUP (member): name[,...] -W|--clip Remove adapter sequences from reads Common Filters A...

    2141 days ago

  • Downloading GATK !

    ...ds after the -- will be passed to dataproc --cluster must be specified after the -- spark properties and some common spark-submit parameters will...

    2090 days ago

  • Install NPM !

    ...installed: gyp javascript-common libjs-async libjs-inherits li...bionic/main amd64 javascript-common all 11 [6,066 B] Get:3 http:...unselected package javascript-common. Preparing to unpack .../01-...1) ... Setting up javascript-common (11) ... Setting up node-coo...

    1568 days ago

  • Install printer in Ubuntu !

    ...ages will be installed: python-ldb python-samba python-tdb samba-common samba-common-bin Suggested packages: p...ntu-0ubuntu2.15) ... Selecting previously unselected package samba-common-bin. Preparing to unpack ......

    1554 days ago

  • Install quast using conda !

    (JitMetaENV) ➜ ~ conda install -c bioconda quast Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer versio...

    1230 days ago