Retrieve NCBI GenBank records with a range of accession numbers
...tothard@gmail.com) use warnings; use strict; use Getopt::Long; use LWP::Simple; use URI::Escape; use LWP::UserAgent; use HTTP::Request::Common; my %param = ( query...2930 days ago
Install ATOM editor on Elemantory OS / Ubuntu
...gconf-service gconf-service-backend gconf2-common libgconf-2-4 The following N...tom gconf-service gconf-service-backend gconf2-common libgconf-2-4 0 upgraded, 5 n...Selecting previously unselected package gconf2-common. (Reading database ... 19427...1190 days ago
BASH script for SelfBLAST a genome
...g you have blast and samtools installed in your system #Author: Jitendra Narayan #USAGE: ./selfBlast.sh extract #USAGE: ./selfBlast.sh all #Common settings FASTAFILE=MergedCo...2666 days ago
Plot custom gene density with R
library(karyoploteR) pp2264 days ago
Estimate Genome Size with Jellyfish and R
jellyfish count -t 8 -C -m 19 -s 5G -o 19mer_out --min-qual-char=? /common/Tutorial/Genome_estimation/sample_read_1.fastq /common/Tutorial/Genome_estimation/sample_read_2.fastq #-t -treads=unit32 Nu...2261 days ago
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