2889 days ago
Modular, efficient and constant-memory single-cell RNA-seq preprocessing
With kallisto | bustools you can Generate a cell x gene or cell x transcript equivalence class count matrix Perform RNA velocity and si...1141 days ago
2674 days ago
2364 days ago
MeDuSa: a multi-draft based scaffolder
...the contigs. MeDuSa formalises the scaffolding problem by means of a combinatorial optimisation formulation on graphs and implements an efficient constant factor approximation algorith...2287 days ago
AGORA: Algorithm for Gene Order Reconstruction in Ancestors
...// | | AGORA is used to generate ancestral genomes for the Genomicus online server for gene order comparison, and has been in constant use in the group since....811 days ago