Results for "context"
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GView is a Java application for viewing and examining prokaryotic genomes in a circular or linear context. It accepts standard sequence file formats and an optional style specificatio...2489 days ago
- ...ata reveal the high accuracy of OrthoGNC. In addition to orthology detection, OrthoGNC can be employed to investigate the conservation of genomic context among potential orthologs det...
2366 days ago
Genomicus: genome browser that enables users to navigate in genomes in several dimensions
...fferent species, and chronologicaly along evolutionary time. Once a query gene has been entered, it is displayed in its genomic context in parallel to the genomic context of all its orthologous and pa...2362 days ago
SMASH: An alignment-free tool to find and visualise rearrangements between pairs of DNA sequences
...ents between pairs of DNA sequences. The detection is based on relative compression, namely using a FCM, also known as Markov model, of high context order (typically 20). The met...2329 days ago
MGcV: the microbial genomic context viewer for comparative genome analysis
...pasting identifiers (one per line) or by using the gene ID search tool or with the BLAST search tool Click "Visualize context". Consult the documen...2290 days ago
- ...perimental). See the API stability docs for more details, including what we mean by stable and experimental in this context.
2258 days ago
- ...range of methods for performing simulations and analyzing the results. The software is a useful tool for system-wide data analysis in a metabolic context and for streamlined reconstru...
2021 days ago
FUMA GWAS: Functional Mapping and Annotation of Genome-Wide Association Studies
...p;The GENE2FUNC function takes a list of gene IDs (as identified by SNP2GENE or as provided manually) and annotates genes in biological context1802 days ago
ClinCNV: Detection of copy number changes in Germline/Trio/Somatic contexts in NGS data
ClinCNV detects CNVs in germline and somatic context in NGS data (targeted and whole-genome). We work in cohorts, so it makes sense to try ClinCNV if you have more than 10 s...1572 days ago
Genomicus: genome browser that enables users to navigate in genomes in several dimensions
...fferent species, and chronologicaly along evolutionary time. Once a query gene has been entered, it is displayed in its genomic context in parallel to the genomic context of all its orthologous and pa...798 days ago
