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CISA: Contig Integrator for Sequence Assembly
...ploy various state-of-the-art assemblers to generate different sets of contigs for bacterial genomes. A tool...A, has been developed to integrate the assemblies into a hybrid set of contigs, resulting in assemblies of s...2713 days ago
2715 days ago
MyPro: A seamless pipeline for automated prokaryotic genome assembly and annotation
...formed better than de novo assemblers and contig integration software. Produces more contiguous assemblies, higher N50 values and lower number of contigs. More at https://sourceforge...2713 days ago
GARM:Genome Assembly, Reconciliation and Merging
...n Debian, Ubuntu, Fedora and BioLinux distributions. The method merges contigs or scaffolds from different a...sions or extensions (CE) problems in the assemblies can be per-formed; contigs are joined back into scaffold...2709 days ago
MeGAMerge: A tool to merge assembled contigs, long reads from metagenomic sequencing runs
MeGAMerge MeGAMerge (A tool to merge assembled contigs, long reads from metagenomic sequencing runs) Descr...t can accept any number of sequence (FASTA) files containing assembled contigs of any length in Multi-FASTA...2709 days ago