2929 days ago
2952 days ago
Trimmomatic: A flexible read trimming tool for Illumina NGS data
Paired End: java -jar trimmomatic-0.35.jar PE -phred33 input_forward.fq.gz input_reverse.fq.gz output_forward_paired.fq.gz output_forward_unpaired.fq.gz output_revers...2943 days ago
2940 days ago
2933 days ago
2933 days ago
HOMER: Software for motif discovery and next-gen sequencing analysis
...ing and storing sequencing files (your own data or from public sources) Chec...nipulating SAM/BAM alignment files Visualizing data in a genome browser RNA-Se...Arrays using R/Bioconductor General Tips for Data Analysis Excel workarounds...2933 days ago
MEDEA: Comparative Genomic Visualization with Adobe Flash
...genomes grows larger, the need to understand, compare, and contrast the data becomes increasingly importan...o detect trends and spot outliers is necessary in such large and complex data sets. More at http://ww...2932 days ago
GATB : Genome Analysis Toolbox with de-Bruijn graph
The Genome Analysis Toolbox with de-Bruijn graph (GATB) provides a set of highly efficient algorithms to analyse NGS data sets. These methods enable the analysis of data sets of any size on multi-core...2930 days ago
2918 days ago