Results for "de Bruijn"
Comments
Comment on "Sibelia: A comparative genomics tool"
...Sequences file 2. Dot file with resulting de Bruijn graph All these files are...n slows down the computation. Resulting de Bruijn graph ----------------------...t value of K --------------- In "Sibelia" de Bruijn graph is constructed (N + 1)...1285 days ago
- Common usage SPAdes: de Bruijn graph based assembler The last assembler we will run is SPAdes. SPAdes is different from the other assemblers in that it generates a final...
2344 days ago
Comment on "Structural variation: the hidden genomic treasure"
...n software suite. A high-speed next-gen sequencing structural variation caller. GRIDSS calls variants based on alignment-guided positional de Bruijn graph break-end assembly, spl...2703 days ago
- ...It can handle highly heterozygotic samples. The following is the assembly outline. First, it constructs contigs using the algorithm based on de Bruijn graph. Second, the order of...
2799 days ago
