Results for "duplicate"
Blogs
BBTools for bioinformatician !
...in=assembly1.fa,assembly2.fa out=merged.fa That will absorb exact duplicates and containments. You can us...lowing the specified number of mismatches or edits).Dedupe can remove duplicate reads from multiple files sim...2269 days ago
Illumina based assembly pipeline steps !
...optional) Variant calling Read alignment (Bowtie 2) Sort and index alignments (SAMtools) Primer sequence removal (iVar; amplicon data only) Duplicate read marking (picard; optiona...875 days ago
Bioinformatics tools to explore SSRs in genomes !
...rious organisms. QDD: QDD (Quick Detection of Duplication) is a software tool that can identify SSRs in DNA sequences and can also identify duplicate loci. It can be used to analy...423 days ago
Common steps for reads mapping !
...the analysis being performed, post-processing of the mapped reads may be necessary. This can include filtering reads based on quality, removing duplicate reads, and calling variants....422 days ago
