Results for "extensions"
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GARM:Genome Assembly, Reconciliation and Merging
...erent assemblers using the same or different sequencing technologies. When scaffolds are provided, a process of finding probable compressions or extensions (CE) problems in the assembli...2707 days ago
Meraculous: De Novo Genome Assembly with Short Paired-End Reads
...elies on an efficient and conservative traversal of the subgraph of the k-mer (deBruijn) graph of oligonucleotides with unique high quality extensions in the dataset, avoiding an e...2384 days ago
DFAST: a flexible prokaryotic genome annotation pipeline for faster genome publication
...reference genomes. In addition, the modular framework of DFAST allows users to customize the annotation workflow easily and will also facilitate extensions for new functions and incorpo...2377 days ago
Building Web UIs With Mojolicious Perl
...ver and many other features one needs to build a web application. It's easy to install, has an applciation generator script and many plugins and extensions. Libraries for developing We...2334 days ago
- ...pairing is ignored. Magic-BLAST incorporates within the NCBI BLAST code framework ideas developed in the NCBI Magic pipeline, in particular hit extensions by local walk and jump (...
2334 days ago
mojolicious: a next generation web framework for the Perl programming language.
...modules to be installed) Fresh code based upon years of experience developing Catalyst, free and open source. Hundreds of 3rd party extensions and high quality spin-of...2318 days ago
NGMLR: long-read mapper designed to align PacBio or Oxford Nanopore
...read and then a banded Smith-Waterman alignment algorithm to compute the final alignment. Ngmlr uses a convex gap cost model that penalizes gap extensions for longer gaps less than for...2215 days ago
- ...ermine the correct extension in 99.7% of cases. PERGA will try to extend the contigs by all feasible nucleotides and determine if these multiple extensions due to sequencing errors or r...
2174 days ago
- ...pairing is ignored. Magic-BLAST incorporates within the NCBI BLAST code framework ideas developed in the NCBI Magic pipeline, in particular hit extensions by local walk and jump (...
2104 days ago
