2610 days ago
2595 days ago
2591 days ago
ChromHMM: Chromatin state discovery and characterization
...ents for large-scale functional and annotation datasets ChromHMM facilitates the biological characterization of each state. ChromHMM also produces files with genome-wide maps of chro...2576 days ago
Enrichr: a comprehensive gene set enrichment analysis
...84 annotated gene sets from 102 gene set libraries. New features have been added to Enrichr including the ability to submit fuzzy sets, upload BED files, improved application program...2568 days ago
CLA: Contig-Layout-Authenticator
...ndly tool that requires a single command line input to generate ordered scaffolds. Script https://sourceforge.net/projects/c-l-authenticator/files/2560 days ago
A Post-assembly genome-improvement toolkit (PAGIT) to obtain annotated genomes from contigs
PAGIT addresses the need for software to generate high quality draft genomes. It is based on a series of programs that we developed: ABACAS, that is able to contiguat...2552 days ago
2536 days ago
eQuant : energy-based quality assessment of protein
...izes a coarse-grained energy model. The overall quality is calculated as well as the reliability of individual residues. You can submit single PDB files or archives containing a set...2509 days ago
2508 days ago